For some reason, DNS is not working at all on my server. It took me a little while to realize it, because my second nameserver was picking up all the slack. I have triple checked that the port is open on the firewall (the same as the second name server) and in the monitor > services it says that the mydns server is online. What logs can I check?
root@myserver:~# netstat -tap | grep dns tcp 0 0 myserver:domain *:* LISTEN 26760/mydns tcp 0 0 localhost:domain *:* LISTEN 26760/mydns tcp6 0 0 localhost:domain [::]:* LISTEN 26760/mydns
I fixed the problem. When I added the new server, I didn't update the GLUE records on godaddy for my nameserver ip's