This has to exist first... /usr/local/ispconfig/server/conf-custom/index/standard_index.html Thats the new Kickstart.php file. Then small mod here... /usr/local/ispconfig/server/plugins-available/apache2_plugin.inc.php I just changed the index.html to index.php at the end there... And now all the new sites are created with a custom index.php file.
